spectrum_utils
About spectrum_utils
spectrum_utils is a Python package for efficient MS/MS spectrum processing and visualization.
spectrum_utils contains the following features:
Spectrum processing
Precursor & noise peak removal
Intensity filtering
Intensity scaling
Peak annotations
Modification-aware (static & variable) peptide fragments
SMILES-based molecules
Mass-over-charge values
Spectrum plotting
Fully customizable individual spectrum plots
Mirror plot of matching spectra
Interactive spectrum plots
See the documentation for more information and detailed examples on how to use this functionality.
Citation
spectrum_utils is freely available as open source under the Apache 2.0 license.
When using spectrum_utils please cite the following manuscript:
Wout Bittremieux. “spectrum_utils: A Python package for mass spectrometry data processing and visualization.” Analytical Chemistry 92 (1) 659-661 (2020) doi:10.1021/acs.analchem.9b04884.